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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015920326.1_cds_XP_016469481.1_62022
CDS Infomation

[gene=LOC107791855] [db_xref=GeneID:107791855] [protein=target of Myb protein 1-like isoform X1] [protein_id=XP_016469481.1] [location=complement(join(7844..8912,9379..9660,9807..9892,9974..10055,10170..10333,10684..10797,11158..11256,11572..11650,12737..12921))] [gbkey=CDS]
Sequence

ATGCTTAGTCCTGATTGGAGGAAAAAAAGAATGATATCATCATTGGGTGCAGCTTCATCT
TCATCTTCTTCATCTTCATCTTCATCAGCAGCAGTTCGTGTTGAAAAGGCAACAAGCGAG
TTCTTGATTGGTCCTGATTGGACTATTAATATTGATATTTGTGATACCATCAATTCTAAC
CATTGGTTAGCAAAAGATGTTGTAAAAGCCGTGAAGAAGAGGTTGCAGCACAAGAACCCC
AAAGTTCAGCTACTTTCTTTAACGCTTTTGGAGACAATGGTGAAGAACTGTGGCGATAAT
GTGCACTTTCAAATAGCTGAAAGAAGCATATTGCAAGACATGGTCAAAATTGTAAAGAAG
AAGACAGATATGCATGTTAGAGATAAAGTACTAGTACTACTGGACTCTTGGCAAGAGGCA
TTTGGTGGCCCTGGAGGAAAGTATCCCCAGTACTATTGGGCTTACGAAGAATTGAGGCGT
GCTGGCGTTGAATTTCCCAAGCGTTCATTTGATACAGCTCCAATTTTTACTCCACCTGTT
ACTCATCCTGCACCAAGACAACCTCAACCTGGTTATGGAATGCCAAGCAATTCCTCAACA
AGACTTGACGAGGCCATGGCAGCAGATATGGAAAACTTAAGCTTGTCCAGCATAAATTCT
ATGAAGGAAGTTGCTGATCTGTTGGCTGATATGCTACAAGCCGTGACTCCAGGCGATCGC
TTGGCTGTACAAGATGAAGTTATAGTTGATCTTGTCTACCAGTGTCGCTCTAACCAGAAG
AAGTTGATGCAAATGTTGACCACCACCGGGGATGAAGAACTTCTGGCTCAGGGTCTTGAA
TTAAATGATAACCTCCAAATGGTGCTGGCTAAACATGACGCAATAGCTTCTGGTTCTCCA
CTTCCAACTGAAGTCCCAAACAACAACATCTCAGCTAGAGAAATGCATGATCCAAGCCTC
AAACCTGCTGAAGTTGAGCCACCTACTCCAGCAGCAGATGCAAAACCTTCTGCACCAGTT
CTTGCACCAACAGCAGGTCAAATTGATGAAGAGGAAGATGAAGAAGATGACTTTGCCCAG
TTAGCTCGAAGACATTCAAAAACAAGTCCAGCAGCGCAAACAAGTGAAGGTATGGTCTCT
GCCTATAATAGCAATTCTACGGGAGAATCATTGGATCCTGTCACAAGCAATGCATTGATT
CTTCGAGATCCGCCTCCAACTGCTATGCCCACGAAAGAACAAGATATAATTGATCTCTTG
AGCCTGACCTTGTCATCAAGTATATATCCCGAGACCCCACAAAATTCTGCTTCAGCCAAT
CATAGCACGCATCAGGAGCCTGTTGCCTCAACCACGCAAGGGAATCCATATGCATCTCAA
GCTTATCTTGGATATCAAGATCAGAGCTTTAACAGTTATGTAGCTCCTTGGGCTCAGACT
CAGCCCCAACCCCAACCTCAATCTCAGTCGCAACCTCAGTTTCCTCCTCAGTTTCAACCT
CAGTCCCAACCTCAGTCCCAACCTCAATATCATCACCAATTTCAAACCCCAACCCAAGCG
CAGTTCCAGACCCAGGCCCAGGCCCAACCTCAAGCCCAGCCTCTGCATCAACCTCATCCT
CGGCCTCAACCACAGTATCCCCAAGAATCATCATTACAATCTCAGCATACCTCGCAACAG
CTTCCACAATGTCCTTTACAAACTGAACTGAACCAACAACCTAGAACTCAGCTAGAACTT
CATCCTCAGCCTCAACAATTACCGCCACGTGCTCAGACTCAATTCCCACAGTACTCTGCT
TATCCGCCTCCACCTTGGGCATCAACTCCCGGATATTTTAGCAATCTGAATCATTCAACT
AGACCGTCCTATATGTACTCAACTCCACAAAACACATCCATGCCTTTGCAAGGTCCTAGA
CCTGTACAGAATGTTAACTCAATTCCTACTATGGGAAGCAATGGTGTAGCTATCAATGGG
GATGCACAGATTCGGCCTAGCCCCAAGACGACATCCTCTACTGCTGGACAAAAACCCTTC
ATTCCATCTTATAGGTTATTTGAAGATCTTAATGTTTTTGGTAACGGGGATCAAAGACAC
AACTCATCTTCAGGTGTATCAGGAACTAACAGCCAAAGTATGGTTGGCGGACGAAAATGA

Peptide Sequence

PEP ID

XP_016469481.1
PEP Infomation

PREDICTED: target of Myb protein 1-like isoform X1 [Nicotiana tabacum]
Sequence

MLSPDWRKKRMISSLGAASSSSSSSSSSSAAVRVEKATSEFLIGPDWTINIDICDTINSN
HWLAKDVVKAVKKRLQHKNPKVQLLSLTLLETMVKNCGDNVHFQIAERSILQDMVKIVKK
KTDMHVRDKVLVLLDSWQEAFGGPGGKYPQYYWAYEELRRAGVEFPKRSFDTAPIFTPPV
THPAPRQPQPGYGMPSNSSTRLDEAMAADMENLSLSSINSMKEVADLLADMLQAVTPGDR
LAVQDEVIVDLVYQCRSNQKKLMQMLTTTGDEELLAQGLELNDNLQMVLAKHDAIASGSP
LPTEVPNNNISAREMHDPSLKPAEVEPPTPAADAKPSAPVLAPTAGQIDEEEDEEDDFAQ
LARRHSKTSPAAQTSEGMVSAYNSNSTGESLDPVTSNALILRDPPPTAMPTKEQDIIDLL
SLTLSSSIYPETPQNSASANHSTHQEPVASTTQGNPYASQAYLGYQDQSFNSYVAPWAQT
QPQPQPQSQSQPQFPPQFQPQSQPQSQPQYHHQFQTPTQAQFQTQAQAQPQAQPLHQPHP
RPQPQYPQESSLQSQHTSQQLPQCPLQTELNQQPRTQLELHPQPQQLPPRAQTQFPQYSA
YPPPPWASTPGYFSNLNHSTRPSYMYSTPQNTSMPLQGPRPVQNVNSIPTMGSNGVAING
DAQIRPSPKTTSSTAGQKPFIPSYRLFEDLNVFGNGDQRHNSSSGVSGTNSQSMVGGRK

Transcript Sequence

Gene sequence data has not been registered.